Warning: This document is for an old version of niworkflows. The main version is master.

NeuroImaging workflows (NiWorkflows): robust processing tools for MRI data

NeuroImaging Workflows (NiWorkflows) is a selection of image processing workflows for magnetic resonance images of the brain. It is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input.

This open-source neuroimaging data processing tool is being developed as a part of the MRI image analysis and reproducibility platform offered by the NiPreps Community.

Documentation: https://www.nipreps.org/niworkflows/

Contents

• Installation
  • External Dependencies
• Library API (application program interface)
  • niworkflows.anat package
  • niworkflows.cli package
  • niworkflows.dwi package
  • niworkflows.engine package
  • niworkflows.func package
  • niworkflows.interfaces package
  • niworkflows.reports package
  • niworkflows.utils package
  • niworkflows.viz package
• What’s new?
  • 1.2.1 (May 26, 2020)
  • 1.0.3 (December 18, 2019)
  • 1.0.2 (December 9, 2019)
  • 1.0.1 (November 27, 2019)
  • 1.0.0 (November 26, 2019)
  • 0.10.4 (October 8, 2019)
  • 0.10.3 (September 9, 2019)
  • 0.10.2 (July 24, 2019)
  • 0.10.1 (July 22, 2019)
  • 0.10.0 (July 12, 2019)
  • 0.9.6 (July 8, 2019)
  • 0.9.5 (June 5, 2019)
  • 0.9.4 (June 5, 2019)
  • 0.9.3 (May 15, 2019)
  • 0.9.2-1 (May 6, 2019)
  • 0.9.2 (May 6, 2019)
  • 0.9.1-1 (May 3, 2019)
  • 0.9.1 (May 3, 2019)
  • 0.9.0 (May 3, 2019)
  • 0.8.2 (April 4, 2019)
  • 0.8.1 (March 15, 2019)
  • 0.8.0 (March 05, 2019)
  • 0.7.2 (February 19, 2019)
  • 0.7.1.post1 (February 12, 2019)
  • 0.7.1 (February 07, 2019)
  • 0.7.0 (February 04, 2019)
  • 0.6.1 (January 23, 2019)
  • 0.6.0 (January 18, 2019)
  • 0.5.4 (January 23, 2019)
  • 0.5.3 (January 08, 2019)
  • 0.5.2.post5 (December 14, 2018)
  • 0.5.2.post4 (December 13, 2018)
  • 0.5.2.post3 (December 13, 2018)
  • 0.5.2.post2 (December 12, 2018)
  • 0.5.2.post1 (December 10, 2018)
  • 0.5.2 (December 8, 2018)
  • 0.5.1 (November 8, 2018)
  • 0.5.0 (October 26, 2018)
  • 0.4.4 (October 15, 2018)
  • 0.4.3 (September 4, 2018)
  • 0.4.2 (July 5, 2018)
  • 0.4.1 (June 7, 2018)
  • 0.4.0 (May 31, 2018)
  • 0.3.13 (May 11, 2018)
  • 0.3.12 (May 05, 2018)
  • 0.3.8 (April 20, 2018)
  • 0.3.7 (March 22, 2018)
  • 0.3.6 (March 14, 2018)
  • 0.3.5 (February 28, 2018)
  • 0.3.4 (February 22, 2018)
  • 0.3.3
  • 0.3.1
  • 0.3.0
  • 0.2.8
  • 0.2.7
  • 0.2.6
  • 0.2.5
  • 0.2.4
  • 0.2.3
  • 0.2.2
  • 0.2.1
  • 0.2.0
  • 0.1.11
  • 0.1.10
  • 0.1.9
  • 0.1.8
  • 0.1.7
  • 0.1.6
  • 0.1.5
  • 0.1.4
  • 0.1.3
  • 0.1.2
  • 0.1.1
  • 0.1.0
  • 0.0.7
  • 0.0.6
  • 0.0.3
  • 0.0.2
  • 0.0.1