Installation

Make sure all of nifreeze’ External Dependencies are installed.

On a functional Python 3.10 (or above) environment with pip installed, nifreeze can be installed using the usual pip install command:

python -m pip install nifreeze

Check your installation with the following command line:

python -c "from nifreeze import __version__; print(__version__)"

External Dependencies

nifreeze requires ANTs, which is leveraged through the Nipype Python interface for registration purposes. There are several ways to install ANTs. Notably, the path to the installed binaries needs to be added to the PATH:

export PATH=/path/to/ants/bin:$PATH