Index

A

ANAT (sdcflows.fieldmaps.EstimatorType attribute)

ApplyCoeffsField (class in sdcflows.interfaces.bspline) au2rads() (in module sdcflows.utils.phasemanip)

B

bids_id (sdcflows.fieldmaps.FieldmapEstimation attribute) bids_root (sdcflows.fieldmaps.FieldmapFile attribute)

bspline_grid() (in module sdcflows.interfaces.bspline) BSplineApprox (class in sdcflows.interfaces.bspline)

C

check_path() (sdcflows.fieldmaps.FieldmapFile method) CheckB0Units (class in sdcflows.interfaces.fmap)

clear_registry() (in module sdcflows.fieldmaps) ConvertWarp (class in sdcflows.interfaces.utils) coolwarm_transparent() (in module sdcflows.viz.utils)

D

delta_te() (in module sdcflows.utils.phasemanip) DenoiseImage (class in sdcflows.interfaces.utils)

Deoblique (class in sdcflows.interfaces.utils) DerivativesDataSink (class in sdcflows.workflows.outputs)

E

entities (sdcflows.fieldmaps.FieldmapFile attribute)

epi_mask() (in module sdcflows.utils.epimanip) EstimatorType (class in sdcflows.fieldmaps)

F

FieldmapEstimation (class in sdcflows.fieldmaps) FieldmapFile (class in sdcflows.fieldmaps) FieldmapReportlet (class in sdcflows.interfaces.reportlets)

find_meta (sdcflows.fieldmaps.FieldmapFile attribute) Flatten (class in sdcflows.interfaces.utils) front() (in module sdcflows.utils.misc)

G

get_free_mem() (in module sdcflows.utils.misc) get_identifier() (in module sdcflows.fieldmaps)

get_trt() (in module sdcflows.utils.epimanip) get_workflow() (sdcflows.fieldmaps.FieldmapEstimation method) GetReadoutTime (class in sdcflows.interfaces.epi)

I

init_3dQwarp_wf() (in module sdcflows.workflows.fit.pepolar) init_coeff2epi_wf() (in module sdcflows.workflows.apply.registration) init_fmap_derivatives_wf() (in module sdcflows.workflows.outputs) init_fmap_preproc_wf() (in module sdcflows.workflows.base) init_fmap_reports_wf() (in module sdcflows.workflows.outputs) init_fmap_wf() (in module sdcflows.workflows.fit.fieldmap)

init_magnitude_wf() (in module sdcflows.workflows.fit.fieldmap) init_phdiff_wf() (in module sdcflows.workflows.fit.fieldmap) init_syn_preprocessing_wf() (in module sdcflows.workflows.fit.syn) init_syn_sdc_wf() (in module sdcflows.workflows.fit.syn) init_topup_wf() (in module sdcflows.workflows.fit.pepolar) init_unwarp_wf() (in module sdcflows.workflows.apply.correction)

L

last() (in module sdcflows.utils.misc)

M

MAPPED (sdcflows.fieldmaps.EstimatorType attribute) metadata (sdcflows.fieldmaps.FieldmapFile attribute)

MetadataError method (sdcflows.fieldmaps.FieldmapEstimation attribute)

O

out_path_base (sdcflows.workflows.outputs.DerivativesDataSink attribute)

P

PadSlices (class in sdcflows.interfaces.utils) path (sdcflows.fieldmaps.FieldmapFile attribute) paths() (sdcflows.fieldmaps.FieldmapEstimation method) PEPOLAR (sdcflows.fieldmaps.EstimatorType attribute)

PHASEDIFF (sdcflows.fieldmaps.EstimatorType attribute) Phasediff2Fieldmap (class in sdcflows.interfaces.fmap) PhaseMap2rads (class in sdcflows.interfaces.fmap) phdiff2fmap() (in module sdcflows.utils.phasemanip) plot_registration() (in module sdcflows.viz.utils)

R

Reoblique (class in sdcflows.interfaces.utils)

S

sdcflows.fieldmaps (module) sdcflows.interfaces (module) sdcflows.interfaces.bspline (module) sdcflows.interfaces.epi (module) sdcflows.interfaces.fmap (module) sdcflows.interfaces.reportlets (module) sdcflows.interfaces.utils (module) sdcflows.utils (module) sdcflows.utils.epimanip (module) sdcflows.utils.misc (module) sdcflows.utils.phasemanip (module) sdcflows.viz (module) sdcflows.viz.utils (module)

sdcflows.workflows (module) sdcflows.workflows.apply (module) sdcflows.workflows.apply.correction (module) sdcflows.workflows.apply.registration (module) sdcflows.workflows.base (module) sdcflows.workflows.fit (module) sdcflows.workflows.fit.fieldmap (module) sdcflows.workflows.fit.pepolar (module) sdcflows.workflows.fit.syn (module) sdcflows.workflows.outputs (module) sources (sdcflows.fieldmaps.FieldmapEstimation attribute) subtract_phases() (in module sdcflows.utils.phasemanip) SubtractPhases (class in sdcflows.interfaces.fmap) suffix (sdcflows.fieldmaps.FieldmapFile attribute)

T

TOPUPCoeffReorient (class in sdcflows.interfaces.bspline)

TransformCoefficients (class in sdcflows.interfaces.bspline)

U

UniformGrid (class in sdcflows.interfaces.utils)

UNKNOWN (sdcflows.fieldmaps.EstimatorType attribute)